BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D11LP1|AL426685
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 1614 0.0
>3x_Contig1791
Length = 39945
Score = 1614 bits (814), Expect = 0.0
Identities = 820/822 (99%)
Strand = Plus / Plus
Query: 1 gatcttcctcctcggttagaaaagtaagttcagttccagttttaccagcacgtccagttc 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 317 gatcttcctcctcggttagaaaagtaagtgcagtaccagttttaccagcacgtccagttc 376
Query: 61 tacctacacgatgcacaaagctgtcaaacgacttaggaaattgtagattcactactaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tacctacacgatgcacaaagctgtcaaacgacttaggaaattgtagattcactactaaag 436
Query: 121 aaacgttaggtatatcgatacctcttccagcgacatcagtagctatgagaatatctactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaacgttaggtatatcgatacctcttccagcgacatcagtagctatgagaatatctactt 496
Query: 181 tcccatttctcaaaagacttaaagagtgttcacgttgttcctgtgattttgagccgtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcccatttctcaaaagacttaaagagtgttcacgttgttcctgtgattttgagccgtgaa 556
Query: 241 gagttgttgctcggaaccgagcctctctaagtttgtcgaataaccagtcagctgttcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagttgttgctcggaaccgagcctctctaagtttgtcgaataaccagtcagctgttcttt 616
Query: 301 tgtaatttatgaatattatgataggagccttgtaatttggtaggaaatcttttacaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgtaatttatgaatattatgataggagccttgtaatttggtaggaaatcttttacaagta 676
Query: 361 tcttaagtttttcttcttcatctggaacataccgtactatttgtttaatttttggtttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcttaagtttttcttcttcatctggaacataccgtactatttgtttaatttttggtttag 736
Query: 421 attcttctcctccaaccgtgacatagcttggctttttcaaatagccattagcaacttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 attcttctcctccaaccgtgacatagcttggctttttcaaatagccattagcaacttttt 796
Query: 481 ctatggtaggtgagaatgtagccgtaaacatcattgtttgtctattggaaattgtttctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctatggtaggtgagaatgtagccgtaaacatcattgtttgtctattggaaattgtttctg 856
Query: 541 tctttgctaaaattgtagtcaactgatcttcaaaaccgaaatctatcatcttgtccgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tctttgctaaaattgtagtcaactgatcttcaaaaccgaaatctatcatcttgtccgctt 916
Query: 601 catccaacactaacgtatttacttgctttaaaaataaaagatgagaatctagacaatcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 catccaacactaacgtatttacttgctttaaaaataaaagatgagaatctagacaatcaa 976
Query: 661 gtaaccttccgggtgtagcaaccaatatatcacatccatctcttaggtttgctgaaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gtaaccttccgggtgtagcaaccaatatatcacatccatctcttaggtttgctgaaattt 1036
Query: 721 cttccaaggaatgtccaccaacaatacttacgatattgcaaggtcgtttccatagtttcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 cttccaaggaatgtccaccaacaatacttacgatattgcaaggtcgtttccatagtttcg 1096
Query: 781 taattgattgcccctcatgttgtatttgctgtgccaattctc 822
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 taattgattgcccctcatgttgtatttgctgtgccaattctc 1138
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6918
Number of Sequences: 1807
Number of extensions: 6918
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)